2018年度研究業績

学術論文誌

• Skibbe, H., Reisert, M., Nakae, K., Watakabe, A., Hata, J., Okano, H., Yamamori, T., & Ishii, S.(2019). PAT:Probabilistic axon tracking for densely labeled neurons in large 3D micrographs.IEEE Transactions on Medical Imaging, 38(1):69-78. doi: 10.1109/TMI.2018.2855736.
• Fuchigami,T., Shikauchi, Y., Nakae, K., Shikauchi, M., Ogawa, T., Ishii, S. (2018). Zero-shot fMRI decoding with three-dimensional registration based on diffusion tensor imaging. Scientific Reports, 2018;8(1):12342. doi:10.1038/s41598-018-30676-3
• Liang, Z., Hamada, Y., Oba, S. & Ishii, S. Characterization of electroencephalog- raphy signals for estimating saliency features in videos. Neural Networks,105, 52-64.
• Yamaguchi, S., Naoki, H., Ikeda, M., Tsukada, Y., Nakano, S., Mori, I., & Ishii,S. (2018). Thermotactic behavioral strategy of C. elegans identified using inverse reinforcement learning. PLoS Computational Biology,14(5): e1006122. https://doi.org/10.1371/journal.pcbi.1006122.
• Kondo, Y., Aoki, K., & Ishii, S. (2018). Inverse tissue mechanics of cell monolayer expansion. PLoS Computational Biology,14(3):e1006029. https://doi.org/10.1371/journal.pcbi.1006029.
• Yamada, T., Nishiyama, M., Oba, S., Jimbo, H. C., Ikeda, K., Ishii, S., Hong, K., & Sakumura, Y. (2018). Computational methods for estimating molecular system from membrane potential reordings in neuronal growth cone. Scientific Reports, 8, 4559, doi: 10.1038/s41598-018-22506-3
• Muta, Y., Fujita, Y., Sumiyama, K., Sakurai, A,. Taketo, M,. Chiba T,. Seno, H,. Aoki, K,. Matsuda, M,. and Imajo,M. (2018) Composite regulation of ERK activity dynamics underlies tumour-specific traits in the intestine.   Nature Communications, 9(1):2174.
• Kobayashi, C., Okamoto, K., Mochizuki, Y., Urakubo, H., Funayama, K., Ishikawa, T., Kashima, T., Ouchi, A., Szymanska, A.F., Ishii, S., Ikegaya, Y. (2018.9) GABAergic inhibition reduces the impact of synaptic excitation on somatic excitation. Neurosci. Res. pii: S0168-0102(18)30228-1.

国際会議

• Fujita, Y. and Ishii, S. (2018) Reproducing the cognitive function with the robustness against the brain structure and with the efficient learning algorithm
  CNS2018, Seattle, USA, 2018.7.15
• Liang, Z., Oba, S. and Ishii, S. (2018) Inherent Feature Connection (I-Con) Map for Liking Emotion Detection: an EEG Study. 32nd British Human Computer Interaction Conference (BHCI 2018): Workshop on Affective Computing, pp. 1-5, http://dx.doi.org/10.14236/ewic/HCI2018.209, Belfast, UK, 2018.07.03.
• Meshgi, K., Oba, S., &Ishii, S. (2018). Efficient diverse ensemble for discriminative co-tracking.                               Computer Vision and Pattern Recoginition 2018(CVPR), 2018.06.07.
• Ken Nakae, Hata Junichi, Skibbe Henrik, Woodward Alexander, Gutierrez Enrique Carlos, Tsukada Hiromachi, Rui Gong, Okano Hideyuki, Ishii Shin　
  Macro-scale connectome by diffusion MRI of exvivo marmoset brain with a pipeline of global fiber reconstruction.
  ISBM 2019, Tokyo, 2019.1.29
• Ken Nakae, Hata Junichi, Skibbe Henrik, Woodward Alexander, Gutierrez Enrique Carlos, Tsukada Hiromachi, Rui Gong, Okano Hideyuki, Ishii Shin　
  Individuality of macro-scale connectome of common marmoset with global fiber reconstruction by diffusion MRI 
  AINI 2018, Wako, 2018.12.21
• Urakubo, H.，Ishii, S. (2018) Improvement of a proof reading software in EM connectomics and its application to the simulation of extracellular DA signaling. 
  Joint symposium of 10th optogenetics research conference and second international symposium on brain information dynamics 2018, Tokyo, 2018.7.5
• Urakubo, H.，Ishii, S. (2018) Development of a unified environment for automated neuronal network reconstruction from EM images
  AINI 2018, Wako, 2018.12.21

国内会議

• Fujita, Y. and Ishii, S. (2018) Reproducing the cognitive function with the robustness against the brain structure and with the efficient learning algorithm
  Neuroscience 2018, Kobe, 2018.7.27
• Ken Nakae, Hata Junichi, Skibbe Henrik, Woodward Alexander, Gutierrez Enrique Carlos, Tsukada Hiromachi, Rui Gong, Okano Hideyuki, Ishii Shin　
  Visualizing an individual diversity of marmoset connectome with a pipeline of tractography by diffusion MRI
  Neuroscience 2018, Kobe, 2018.7.27
• Urakubo, H., Parajuli, L.K., Bullmann, T., Oba, S., Okabe, S., Ishii, S. (2018) Multi-label volume reconstruction of FIB/SEM images and its application to the simulation of extracellular DA signaling
  Neuroscience 2018, Kobe, 2018.7.26 
• Urakubo, H.  (2018) Automated 3D reconstruction from a 2D stack of neuronal EM images 
  The 74th Annual Meeting of The Japanese Society of Microscopy, Fukuoka, 2018.5.31
• 窪田芳之、浦久保秀俊 (2019) Google Cloudを用いた神経組織SEM連続断面データの解析例の実際 
  日本顕微鏡学会「生体ボリュームイメージング研究会第3回研究会」, Fukuoka, 2019.2.22